Molecular Characterization and Expression Analysis of Adrenergic Receptor Beta 2 (ADRB2) Gene before and after Exercise in the Horse

Article information

Asian-Australas J Anim Sci.. 2015;28(5):686-690
Department of Animal Science, College of Natural Resources and Life Sciences, Pusan National University, Miryang 627-702, Korea
1Life and Industry Convergence Research Institute, College of Natural Resources and Life Sciences, Pusan National University, Miryang 627-702, Korea.
2Genomic informatics Center, Hankyong National University, Anseong 456-749, Korea.
*Corresponding Authors: Hak-Kyo Lee. Tel: +82-31-670-5656, Fax: +82-31-670-5671, E-mail: breedlee@empas.com / Byung-Wook Cho. Tel: +82-55-350-5515, Fax: +82-55-350-5519; E-mail: bwcho@pusan.ac.kr
a

These authors contributed equally to this work.

Received 2014 July 29; Revised 2014 August 28; Accepted 2014 September 23.

Abstract

The adrenergic receptor beta 2 (ADRB2) plays a role in various physiological responses of the muscle to exercise, such as contraction and relaxation. Given its important role in muscle function, we investigated the structure of the horse ADRB2 gene and its expression pattern after exercise to determine if it can serve as a putative biomarker for recovery. Evolutionary analyses using synonymous and non-synonymous mutation ratios, were compared with other species (human, chimpanzee, mouse, rat, cow, pig, chicken, dog, and cat), and revealed the occurrence of positive selection in the horse ADRB2 gene. In addition, expression analyses by quantitative polymerase chain reaction exhibited ubiquitous distribution of horse ADRB2 in various tissues including lung, skeletal muscle, kidney, thyroid, appendix, colon, spinal cord and heart, with the highest expression observed in the lung. The expression of ADRB2 in skeletal muscle was significantly up-regulated about four folds 30 minutes post-exercise compared to pre-exercise. The expression level of ADRB2 in leukocytes, which could be collected with convenience compared with other tissues in horse, increased until 60 min after exercise but decreased afterward until 120 min, suggesting the ADRB2 expression levels in leukocytes could be a useful biomarker to check the early recovery status of horse after exercise. In conclusion, we identified horse ADRB2 gene and analyzed expression profiles in various tissues. Additionally, analysis of ADBR2 gene expression in leukocytes could be a useful biomarker useful for evaluation of early recovery status after exercise in racing horses.

INTRODUCTION

Adrenergic receptors play an important role in physiological adaptation of mammalian cells. Catecholamines interact with adrenergic receptors (α and β receptors), which stimulate the sympathetic nervous system. These receptors belong to the G-protein-coupled receptor family (McGraw and Liggett, 2005). Activation of G-protein causes the intracellular concentration of the secondary messenger cyclic adenosine monophosphate to increase, resulting in heart muscle contraction, smooth muscle relaxation and glycogenolysis (Rang et al., 2003).

Adrenergic receptor beta 2 (ADRB2) stimulation leads to the activation of both stimulatory and inhibitory α-subunits of the guanosine triphosphate activated protein. Also, many studies of ADRB2 gene have suggested that genetic influence is caused by non-synonymous single nucleotide polymorphism. The Arg16/Gly16 polymorphism might also associate with endurance during exercise (Wolfarth et al., 2007). Moreover, ADRB2 is associated with human peripheral blood, physiological response to exercise, and recovery (Zieker et al., 2005; MacNeil et al., 2010). Despite the established importance of the ADRB2 gene in muscle function, its structure and expression have not been reported in horse.

In previous study, we conducted RNA-sequencing in skeletal muscle of six Thoroughbred horses before and after exercise, and found the fold-change value of ADRB2 gene was increased significantly after exercise (Park et al., 2012). The objective of this study was to investigate the sequence and expression pattern of the ADRB2 gene in various horse tissues and leukocytes to evaluate the gene as a biomarker on the recovery of racing horse.

MATERIALS AND METHODS

Tissue and blood samples

Blood samples were obtained from three thoroughbred horses, which were maintained at the Ham-an Racing Horse Resort and Training Center, South Korea. Blood was collected before and after trotting on a treadmill at 30 min intervals from 30 to 120 min. The National Institute of Subtropical Agriculture, Rural Development Administration, provided three Jeju horses, which were used for tissue sampling. Skeletal muscle, kidney, thyroid, lung, appendix, colon, spinal cord and heart tissues were stored in a liquid nitrogen tank until RNA extraction was done. All procedures were conducted by following the protocol that had been reviewed and approved by the Institutional Animal Care and Use Committee at Pusan National University (protocol numbers: PNU-2014-0644, PNU-2014-0645).

Bioinformatic analysis

The ADRB2 genomic DNA and amino acid sequences of various species (horse, human, chimpanzee, mouse, rat, cow, pig, chicken, dog, and cat) were retrieved from the Ensemble database (http://www.ensembl.org/) and aligned with BioEdit software using the ClustalW method. Phylogenetic analyses were performed with MEGA5 software (Tamura et al., 2011) using the Neighbor-Joining method (Saitou and Nei, 1987).

RNA extraction, cDNA synthesis, and real-time polymerase chain reaction

Trizol (Invitrogen, Carlsbad, CA, USA) was used to extract total RNA from tissue samples (skeletal muscle, kidney, thyroid, lung, appendix, colon, spinal cord, and heart) and leukocytes from horses after exercise according to manufacturer instructions. Total RNA was quantified by NanoDrop spectrophotometer (Thermo Fisher Scientific Inc., Waltham, MA, USA). The horse ADRB2 transcript was analyzed by real-time polymerase chain reaction (RT-PCR) amplification. The primers were designed with PRIMER3 software (http://frodo.wi.mit.edu/primer3/). The RT-PCR conditions were as follows: an initial step at 94°C for 10 min; 35 cycles at 94°C for 30 s, 60°C for 30 s, and 72°C for 30 s; and a final step at 72°C for 10 min. The RT-PCR products were analyzed by electrophoresis on a 2.0% Seakem LE agarose gel (Lonza, Basel, Switzerland). PCR products were normalized against the glyceraldehyde 3-phosphate dehydrogenase (GAPDH) gene.

Quantitative real-time polymerase chain reaction analysis

Quantitative RT-PCR (qPCR) was conducted to analyze expression of ADRB2 with a CFX-96 RT-PCR detection system (BioRad, Hercules, CA, USA). The PCR conditions were as follows: an initial step at 94°C for 3 min; 39 cycles at 94°C for 10 s, 60°C for 30 s, and 72°C for 30 s; and a final step at 72°C for 10 min. Dissociation was performed at 0.5°C increments from 55°C to 95°C for over 25 min. All samples were measured in triplicates to ensure reproducibility, and Ct values were calculated by the 2−ΔΔCt method (Livak and Schmittgen, 2001). The GAPDH gene was used for reference.

Statistical analysis

Both T-test and analysis of variance statistical test was conducted to determine significance levels. Data were shown by mean±standard error of mean.

RESULTS AND DISCUSSION

The horse ADRB2 gene sequences were obtained from both whole genome sequencing and RNA-seq (Park et al., 2012). To compare the horse ADRB2 gene with other animals, ADRB2 genes were retrieved from the Ensemble database. In the prediction study, horse ADRB2 is a G protein-coupled receptor with rhodopsin-like domain with 7 transmembrane domains, and the amino acid sequences within these domains were conserved well compared to the sequences outside the domains (Figure 1A). This indicates that the horse ADRB2 gene has the same biological functions as ADRB2 in other animals. High similarity was found with human and chimpanzee, while low similarity was found in chicken (Figure 1B). In the analysis of genomic structure, horse ADRB2 was encoded on a single copy of gene and had a single exon without intron. The substitution ratio of non-synonymous (Ka)/synonymous (Ks) nucleotides was less than one (Table 1). Assuming that protein-coding regions in the human genome are under positive selection during evolution (Bustamante et al., 2005), these results illustrate that non-synonymous substitutions occurred faster than synonymous substitutions and that positive selection occurred in the ADRB2 gene during evolution in the horse. This ratio also demonstrates profitable evolution of the ADRB2 gene in various species.

Figure 1

Sequence analysis of horse ADRB2 gene. (A) Alignment of amino acid sequences of the ADRB2 gene in various species. The domains of G protein-coupled receptor, rhodopsin-like (dashed box) and 7 transmembrane (solid boxes) are conserved well between the species. (B) Phylogenetic analysis the ADRB2 gene in various species. The phylogenetic tree for the ADRB2 gene in various species was obtained by the neighbor-joining method and bootstrap 1000. ADRB2, adrenergic receptor beta 2.

Synonymous (Ks) and non-synonymous (Ka) substitutions per site in the ADRB2 gene of various species

The RT-PCR and qPCR analyses showed that the horse ADRB2 gene is expressed in various tissues such as skeletal muscle, kidney, thyroid, lung, appendix, colon, spinal cord, and heart (Figure 2A). Among these tissues, the expression of ADRB2 gene was highest in lung, while lowest in skeletal muscle and appendix. Next, the expression pattern of ADRB2 gene after exercise was analyzed in skeletal muscle and leukocytes (Figure 2B). Expression in muscle was significantly increased after 30 min of exercise. In leukocytes, the expression of ADRB2 gene increased after 30 and 60 min of exercise, but decreased from 90 min and reached to the basal level after 120 min of exercise (Figure 2C).

Figure 2

Analysis of the horse ADRB2 gene expression in various tissues and before and after exercise. (A) RT-PCR of the ADRB2 gene in various horse tissues including the skeletal muscle, kidney, thyroid, lung, appendix, colon, spinal cord, and heart (lane 1–8 in order). ADRB2 was expressed in all tested horse tissues. Then the expression level of the ADRB2 gene in various horse tissues by qPCR (n = 3 for each tissues, p = 0.069). (B) The expression of ADRB2 gene in horse skeletal muscle before and 30 min after exercise. The values of fold change were determined by NGS RNA-sequencing (n = 5 for each group). The ADRB2 gene was expressed higher about 4 folds after exercise (* means p<0.05). (C) The expression of ADRB2 gene in horse leukocytes. The expression level of ADRB2 gene in leukocytes was determined by qPCR. The ADRB2 expression was up-regulated after exercise until 60 min, but decreased afterward and reached to basal level at 120 min (n = 3, p<0.001). All data were shown as mean± standard error of mean. ADRB2, adrenergic receptor beta 2; RT-PCR, real-time polymerase chain reaction; qPCR, quantitative RT-PCR; NGS, next generation sequencing.

There are substantial published researches on the relations between ADRB2 polymorphisms and physiological phenotypes, especially with regards to lung disease, in human. For example, ADRB2 is expressed in many cell types of lung tissue, and there is a correlation between ADRB2 polymorphisms (Gly16/Arg16 and Glu27/Gln27) and chronic obstructive pulmonary disease (COPD). The frequency of the Arg16 allele was lower in Chinese patients with COPD than in healthy patients (Ho et al., 2001), while the frequency of the Gln27 allele was higher in Egyptian patients with COPD than in healthy patients (Hegab et al., 2004). In the lung health study, 27 smokers with a Glu27/Gln27 heterozygous genotype were protected from lung malfunction compared to a control population with a homozygous genotype (Joos et al., 2003). In this study, any non-synonymous nucleotide substitution of horse ADRB2 was not found. This may due to the small number of horse samples or no existence of non-synonymous nucleotide substitution in horse ADRB2.

There is some evidence which suggests that ADRB2 gene is related to the endurance and recovery of exercise in humans (Zieker et al., 2005; Wolfarth et al., 2007; MacNeil et al., 2010). The substitution of amino acid from Arg to Gly on the 16th codon of human ADRB2 is unfavorable for endurance performance and frequently found in a sedentary person. In addition, ADRB2 expression is regulated by exercise in muscle and blood cells. Given this information, we analyzed the expression pattern of ADRB2 gene in both skeletal muscle and blood cells pre- and post- exercise in horse. As shown in results, horse ADRB2 expression was regulated depending on the exercise in both cell types, suggesting the ADRB2 gene might respond to stress caused by exercise and might serve as a biomarker for exercise and/or recovery in horse. For further studies, the mechanism and cell signaling pathway that regulates the expression of the ADRB2 gene during exercise should be investigated and, more importantly, the consequences of increased and/or decreased ADRB2 gene expression should be studied at the molecular level. This study provides useful sequence and expression information of the horse ADRB2 gene after exercise, and suggests that ADRB2 gene as an early biomarker for evaluating the status of horse after racing.

ACKNOWLEDGMENTS

This work was supported by a grant from the Next Generation BioGreen 21 Program (No. PJ011044 and PJ011173), Rural Development Administration, Republic of Korea.

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Figure 1

Sequence analysis of horse ADRB2 gene. (A) Alignment of amino acid sequences of the ADRB2 gene in various species. The domains of G protein-coupled receptor, rhodopsin-like (dashed box) and 7 transmembrane (solid boxes) are conserved well between the species. (B) Phylogenetic analysis the ADRB2 gene in various species. The phylogenetic tree for the ADRB2 gene in various species was obtained by the neighbor-joining method and bootstrap 1000. ADRB2, adrenergic receptor beta 2.

Figure 2

Analysis of the horse ADRB2 gene expression in various tissues and before and after exercise. (A) RT-PCR of the ADRB2 gene in various horse tissues including the skeletal muscle, kidney, thyroid, lung, appendix, colon, spinal cord, and heart (lane 1–8 in order). ADRB2 was expressed in all tested horse tissues. Then the expression level of the ADRB2 gene in various horse tissues by qPCR (n = 3 for each tissues, p = 0.069). (B) The expression of ADRB2 gene in horse skeletal muscle before and 30 min after exercise. The values of fold change were determined by NGS RNA-sequencing (n = 5 for each group). The ADRB2 gene was expressed higher about 4 folds after exercise (* means p<0.05). (C) The expression of ADRB2 gene in horse leukocytes. The expression level of ADRB2 gene in leukocytes was determined by qPCR. The ADRB2 expression was up-regulated after exercise until 60 min, but decreased afterward and reached to basal level at 120 min (n = 3, p<0.001). All data were shown as mean± standard error of mean. ADRB2, adrenergic receptor beta 2; RT-PCR, real-time polymerase chain reaction; qPCR, quantitative RT-PCR; NGS, next generation sequencing.

Table 1

Synonymous (Ks) and non-synonymous (Ka) substitutions per site in the ADRB2 gene of various species

Ka/Ks 1 2 3 4 5 6 7 8 9 10
1. Horse 0.143 0.143 0.260 0.229 0.223 0.364 0.531 0.145 0.184
2. Human 0.102 0.013 0.282 0.202 0.252 0.416 0.544 0.198 0.207
3. Chimpanzee 0.104 0.019 0.282 0.204 0.253 0.419 0.543 0.194 0.209
4. Mouse 0.189 0.226 0.225 0.087 0.384 0.583 0.601 0.326 0.321
5. Rat 0.157 0.144 0.148 0.055 0.322 0.482 0.593 0.260 0.280
6. Cow 0.158 0.182 0.189 0.244 0.199 0.336 0.553 0.247 0.206
7. Pig 0.324 0.360 0.367 0.452 0.370 0.274 0.737 0.388 0.246
8. Chicken 0.414 0.416 0.418 0.452 0.428 0.422 0.586 0.510 0.509
9. Dog 0.113 0.156 0.158 0.241 0.162 0.178 0.338 0.393 0.160
10. Cat 0.144 0.177 0.181 0.233 0.190 0.138 0.221 0.406 0.158

ADRB2, adrenergic receptor beta 2.

Average of Ka ratio was 0.324 and Ks ratio was 0.249.