Anim Biosci > Volume 32(12); 2019 > Article |
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Clade | OTU1) | No. of clone | Closest relative (Accession No.) | Similarity (%) | HS score2) |
---|---|---|---|---|---|
I | H45 | 1 | Ruminococcaceae bacterium D16 (NZ_ADDX01000022) | 86 | 92.5 |
H47 | 1 | Ruminococcaceae bacterium D16 (NZ_ADDX01000022) | 87 | 95.0 | |
L20 | 5 | Ruminococcaceae bacterium D16 (NZ_ADDX01000022) | 87 | 95.0 | |
L66 | 1 | Ruminococcaceae bacterium D16 (NZ_ADDX01000022) | 86 | 90.0 | |
L54 | 2 | Ruminococcaceae bacterium D16 (NZ_ADDX01000022) | 76 | 82.5 | |
H61 | 3 | Ostrich gut clone OstMCfhs-11 (AB531081) | 84 | 90.0 | |
H66 | 1 | Ostrich gut clone OstMCfhs-11 (AB531081) | 85 | 90.0 | |
L32 | 2 | Ostrich gut clone OstMCfhs-11 (AB531081) | 85 | 90.0 | |
L41 | 1 | Ostrich gut clone OstMCfhs-11 (AB531081) | 89 | 97.5 | |
L44 | 2 | Ostrich gut clone OstMCfhs-11 (AB531081) | 84 | 90.0 | |
H01 | 6 | Ostrich gut clone OstMCfhs-11 (AB531081) | 84 | 90.0 | |
L37 | 1 | Ostrich gut clone OstMCfhs-11 (AB531081) | 84 | 90.0 | |
II | H43 | 1 | Ostrich gut clone OstMCfhs-45 (AB531115) | 93 | 95.0 |
L09 | 3 | Ostrich gut clone OstMCfhs-45 (AB531115) | 93 | 95.0 | |
L42 | 1 | Ostrich gut clone OstMCfhs-45 (AB531115) | 92 | 92.5 | |
L84 | 3 | Ostrich gut clone OstMCfhs-45 (AB531115) | 94 | 95.0 | |
H44 | 4 | Ostrich gut clone OstPCfhs-36 (AB531060) | 99 | 97.5 | |
L15 | 4 | Ostrich gut clone OstMCfhs-22 (AB531092) | 98 | 97.5 | |
L34 | 1 | Marvinbryantia formatexigens DSM 14469 (NZ_ACCL02000005) | 97 | 100.0 | |
H42 | 2 | Bryantella hydrogenotrophica DSM 10507 (NZ_ACBZ01000230) | 97 | 100.0 | |
L71 | 1 | Bryantella hydrogenotrophica DSM 10507 (NZ_ACBZ01000230) | 96 | 100.0 | |
III | H33 | 3 | Ostrich gut clone OstMCfhs-46 (AB531116) | 93 | 87.5 |
H34 | 3 | Clostridium bartlettii DSM 16795 (NZ_ABEZ02000016) | 96 | 95.0 | |
H51 | 1 | Clostridium bartlettii DSM 16795 (NZ_ABEZ02000016) | 96 | 92.5 | |
H82 | 1 | Clostridium bartlettii DSM 16795 (NZ_ABEZ02000016) | 98 | 90.0 | |
L17 | 1 | Clostridium bartlettii DSM 16795 (NZ_ABEZ02000016) | 98 | 90.0 | |
H17 | 9 | Clostridium sp. CA6 (GU124152) | 95 | 90.0 | |
H41 | 5 | Clostridium sp. CA6 (GU124152) | 95 | 90.0 | |
H50 | 1 | Clostridium sp. CA6 (GU124152) | 93 | 87.5 | |
L03 | 2 | Clostridium sp. CA6 (GU124152) | 94 | 90.0 | |
L08 | 6 | Clostridium sp. CA6 (GU124152) | 95 | 90.0 | |
IV | L29 | 1 | Mitsuokella multacida DSM 20544 (NZ_ABWK02000017) | 88 | 95.0 |
H38 | 1 | Phascolarctobacterium sp. YIT 12067 (NZ_AEVN01000006) | 93 | 80.0 | |
L45 | 1 | Phascolarctobacterium sp. YIT 12067 (NZ_AEVN01000006) | 93 | 82.5 | |
V | L01 | 5 | Eubacterium hallii DSM 3353 (ACEP01000047) | 74 | 70.0 |
H04 | 7 | Eubacterium hallii DSM 3353 (ACEP01000047) | 90 | 65.0 | |
L02 | 7 | Eubacterium hallii DSM 3353 (ACEP01000047) | 90 | 65.0 |
1) OTU names starting with “H” and “L” were derived from the high-intake library and a low-intake library, respectively. OTU names are representative of the clone name of each OTU.
2) HS score was calculated according to the methods of Henderson et al [24].